SNP Detail For rs6431731
1.Mapping Information
Human SNP ID rs6431731
Human chromosome chr2
Human SNP position 15722878
Pig chromosome chr3
Pig SNP position 129895728
2.Annotation Information
PubMed ID22479191
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22479191
StudyGenome-wide association and functional follow-up reveals new loci for kidney function.
Disease/TraitChronic kidney disease
Initial sample74,354 European ancestry individuals
Replication sample56,246 European ancestry individuals
Region2p24.3
Chromosome idchr2
Chromosome position15722878
Reported geneDDX1
Mapped geneLOC101926966 - LOC105373441
Upstream gene id101926966
Downstream gene id105373441
SNP gene ids
Upstream gene distance3917
Downstream gene distance58298
SNP risk allelers6431731-?
SNPsrs6431731
Merged0
SNP id current6431731
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.00000004
Pvalue mlog7.39794000867203
P value text
Or beta0.0127
%95 Ci[0.0082-0.0172] ml/min/1.73m^2 decrease
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitchronic kidney disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003884
Study accessionGCST001466