Human SNP ID | rs6431731 |
---|---|
Human chromosome | chr2 |
Human SNP position | 15722878 |
Pig chromosome | chr3 |
Pig SNP position | 129895728 |
PubMed ID | 22479191 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22479191 |
Study | Genome-wide association and functional follow-up reveals new loci for kidney function. |
Disease/Trait | Chronic kidney disease |
Initial sample | 74,354 European ancestry individuals |
Replication sample | 56,246 European ancestry individuals |
Region | 2p24.3 |
Chromosome id | chr2 |
Chromosome position | 15722878 |
Reported gene | DDX1 |
Mapped gene | LOC101926966 - LOC105373441 |
Upstream gene id | 101926966 |
Downstream gene id | 105373441 |
SNP gene ids | |
Upstream gene distance | 3917 |
Downstream gene distance | 58298 |
SNP risk allele | rs6431731-? |
SNPs | rs6431731 |
Merged | 0 |
SNP id current | 6431731 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | |
Or beta | 0.0127 |
%95 Ci | [0.0082-0.0172] ml/min/1.73m^2 decrease |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | chronic kidney disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003884 |
Study accession | GCST001466 |