SNP Detail For rs641862
1.Mapping Information
Human SNP ID rs641862
Human chromosome chr13
Human SNP position 110137885
Pig chromosome chr11
Pig SNP position 84366117
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region13q34
Chromosome idchr13
Chromosome position110137885
Reported geneCOL4A1
Mapped geneLOC101927712
Upstream gene id
Downstream gene id
SNP gene ids101927712
Upstream gene distance
Downstream gene distance
SNP risk allelers641862-G
SNPsrs641862
Merged0
SNP id current641862
Contextregulatory_region_variant
Intergenic0
Allele frequency0.062
P value0.0000007
Pvalue mlog6.15490195998574
P value text(IGFBP-3 )
Or beta0.03
%95 Ci[NR] ng/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitIGFBP-3 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004626
Study accessionGCST001762