Human SNP ID | rs6413458 |
---|---|
Human chromosome | chr2 |
Human SNP position | 21008720 |
Pig chromosome | chr3 |
Pig SNP position | 125341963 |
PubMed ID | 23118302 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23118302 |
Study | Genome-wide association study evaluating lipoprotein-associated phospholipase A2 mass and activity at baseline and after rosuvastatin therapy. |
Disease/Trait | Lipoprotein-associated phospholipase A2 activity and mass |
Initial sample | 6,851 European ancestry individuals |
Replication sample | 13,664 European ancestry individuals |
Region | 2p24.1 |
Chromosome id | chr2 |
Chromosome position | 21008720 |
Reported gene | APOB |
Mapped gene | APOB |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 338 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6413458-T |
SNPs | rs6413458 |
Merged | 0 |
SNP id current | 6413458 |
Context | synonymous_variant |
Intergenic | 0 |
Allele frequency | 0.02 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (mass) |
Or beta | 0.0398 |
%95 Ci | [0.0088-0.0708] ng/ml decrease |
Platform | Illumina [796174] |
CNV | N |
Mapped trait | lipoprotein-associated phospholipase A(2) measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004746 |
Study accession | GCST001727 |