Human SNP ID | rs637644 |
---|---|
Human chromosome | chr18 |
Human SNP position | 65231430 |
Pig chromosome | chr1 |
Pig SNP position | 174301272 |
PubMed ID | 24025145 |
---|---|
Journal | Breast Cancer Res |
Link | www.ncbi.nlm.nih.gov/pubmed/24025145 |
Study | A genome-wide association study of chemotherapy-induced alopecia in breast cancer patients. |
Disease/Trait | Adverse response to chemotherapy in breast cancer (alopecia) (cyclophosphamide+doxorubicin+/-5FU) |
Initial sample | 64 Japanese ancestry cases, 27 Japanese ancestry controls |
Replication sample | NA |
Region | 18q22.1 |
Chromosome id | chr18 |
Chromosome position | 65231430 |
Reported gene | CDH7 |
Mapped gene | LOC105372168 - LOC105372169 |
Upstream gene id | 105372168 |
Downstream gene id | 105372169 |
SNP gene ids | |
Upstream gene distance | 87302 |
Downstream gene distance | 233462 |
SNP risk allele | rs637644-G |
SNPs | rs637644 |
Merged | 0 |
SNP id current | 637644 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.8 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (Allelic) |
Or beta | 32.5 |
%95 Ci | [4.08-259] |
Platform | Illumina [555600] |
CNV | N |
Mapped trait | response to cyclophosphamide, chemotherapy-induced alopecia, response to 5__ fluorouracil, response to doxorubicin |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_1902518, http://www.ebi.ac.uk/efo/EFO_0005400, http://purl.obolibrary.org/obo/GO_0036275, http://purl.obolibrary.org/obo/GO_1902520 |
Study accession | GCST002178 |