SNP Detail For rs625132
1.Mapping Information
Human SNP ID rs625132
Human chromosome chr2
Human SNP position 31259434
Pig chromosome JH118557-1
Pig SNP position 32846
2.Annotation Information
PubMed ID22139419
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/22139419
StudyNew gene functions in megakaryopoiesis and platelet formation.
Disease/TraitPlatelet count
Initial sample47,005 European ancestry individuals, 1,661 Val Borbera individuals
Replication sampleUp to 18,838 European ancestry individuals
Region2p23.1
Chromosome idchr2
Chromosome position31259434
Reported geneEHD3
Mapped geneEHD3
Upstream gene id
Downstream gene id
SNP gene ids30845
Upstream gene distance
Downstream gene distance
SNP risk allelers625132-G
SNPsrs625132
Merged0
SNP id current625132
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000000000009
Pvalue mlog13.0457574905606
P value text
Or beta4.236
%95 Ci[3.12-5.35] 10^9/l increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitplatelet count
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004309
Study accessionGCST001337