SNP Detail For rs62238885
1.Mapping Information
Human SNP ID rs62238885
Human chromosome chr22
Human SNP position 31742152
Pig chromosome chr14
Pig SNP position 51678079
2.Annotation Information
PubMed ID24939585
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24939585
StudyGenome-wide association analysis demonstrates the highly polygenic character of age-related hearing impairment.
Disease/TraitAge-related hearing impairment
Initial sample1,489 European ancestry individuals
Replication sampleNA
Region22q12.2
Chromosome idchr22
Chromosome position31742152
Reported geneDEPDC5
Mapped genePRR14L
Upstream gene id
Downstream gene id
SNP gene ids253143
Upstream gene distance
Downstream gene distance
SNP risk allelers62238885-?
SNPsrs62238885
Merged0
SNP id current62238885
Contextintron_variant
Intergenic0
Allele frequency
P value0.000002
Pvalue mlog5.69897000433601
P value text(PC2)
Or beta0.1541
%95 Ci[NR] unit increase
PlatformIllumina [4167292] (imputed)
CNVN
Mapped traitage-related hearing impairment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005782
Study accessionGCST002491