Human SNP ID | rs62174474 |
---|---|
Human chromosome | chr2 |
Human SNP position | 187315682 |
Pig chromosome | chr15 |
Pig SNP position | 102411820 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Vascular brain injury |
Initial sample | up to 2,940 individuals |
Replication sample | NA |
Region | 2q32.1 |
Chromosome id | chr2 |
Chromosome position | 187315682 |
Reported gene | intergenic |
Mapped gene | LOC105373787 - CALCRL |
Upstream gene id | 105373787 |
Downstream gene id | 10203 |
SNP gene ids | |
Upstream gene distance | 165969 |
Downstream gene distance | 26281 |
SNP risk allele | rs62174474-C |
SNPs | rs62174474 |
Merged | 0 |
SNP id current | 62174474 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.9439 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 0.7084 |
%95 Ci | [0.4-1.02] unit decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | vascular brain injury measurement, vascular brain injury |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006800, http://www.ebi.ac.uk/efo/EFO_0006791 |
Study accession | GCST002590 |