Human SNP ID | rs62164511 |
---|---|
Human chromosome | chr2 |
Human SNP position | 55968561 |
Pig chromosome | chr3 |
Pig SNP position | 90078220 |
PubMed ID | 24929828 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24929828 |
Study | Genome-wide association analysis identifies six new loci associated with forced vital capacity. |
Disease/Trait | Forced vital capacity |
Initial sample | 52,253 European ancestry indiviudals |
Replication sample | 32,917 European ancestry individuals, 6,070 African American individuals, 849 Hispanic individuals, 8,637 East Asian ancestry individuals |
Region | 2p16.1 |
Chromosome id | chr2 |
Chromosome position | 55968561 |
Reported gene | EFEMP1 |
Mapped gene | MIR217HG, LOC105374690 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 104355290, 105374690 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs62164511-A |
SNPs | rs62164511 |
Merged | 0 |
SNP id current | 62164511 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.902 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (AA) |
Or beta | 84.664 |
%95 Ci | [52.98-116.35] ml decrease |
Platform | Affymetrix, Illumina [2762059] (imputed) |
CNV | N |
Mapped trait | vital capacity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004312 |
Study accession | GCST002483 |