SNP Detail For rs62164511
1.Mapping Information
Human SNP ID rs62164511
Human chromosome chr2
Human SNP position 55968561
Pig chromosome chr3
Pig SNP position 90078220
2.Annotation Information
PubMed ID24929828
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24929828
StudyGenome-wide association analysis identifies six new loci associated with forced vital capacity.
Disease/TraitForced vital capacity
Initial sample52,253 European ancestry indiviudals
Replication sample32,917 European ancestry individuals, 6,070 African American individuals, 849 Hispanic individuals, 8,637 East Asian ancestry individuals
Region2p16.1
Chromosome idchr2
Chromosome position55968561
Reported geneEFEMP1
Mapped geneMIR217HG, LOC105374690
Upstream gene id
Downstream gene id
SNP gene ids104355290, 105374690
Upstream gene distance
Downstream gene distance
SNP risk allelers62164511-A
SNPsrs62164511
Merged0
SNP id current62164511
Contextintron_variant
Intergenic0
Allele frequency0.902
P value0.0000002
Pvalue mlog6.69897000433601
P value text(AA)
Or beta84.664
%95 Ci[52.98-116.35] ml decrease
PlatformAffymetrix, Illumina [2762059] (imputed)
CNVN
Mapped traitvital capacity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004312
Study accessionGCST002483