Human SNP ID | rs621313 |
---|---|
Human chromosome | chr11 |
Human SNP position | 89180495 |
Pig chromosome | chr9 |
Pig SNP position | 25167386 |
PubMed ID | 23326517 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23326517 |
Study | Insights into the genetic architecture of early stage age-related macular degeneration: a genome-wide association study meta-analysis. |
Disease/Trait | Age-related macular degeneration |
Initial sample | 3,772 European ancestry cases, 16,033 European ancestry controls |
Replication sample | 264 Asian ancestry cases, 3,926 Asian ancestry controls |
Region | 11q14.3 |
Chromosome id | chr11 |
Chromosome position | 89180495 |
Reported gene | TYR |
Mapped gene | TYR |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 7299 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs621313-? |
SNPs | rs621313 |
Merged | 0 |
SNP id current | 621313 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.49 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (EA) |
Or beta | 1.15 |
%95 Ci | [1.09-1.2] |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | age-related macular degeneration |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001365 |
Study accession | GCST001814 |