SNP Detail For rs621313
1.Mapping Information
Human SNP ID rs621313
Human chromosome chr11
Human SNP position 89180495
Pig chromosome chr9
Pig SNP position 25167386
2.Annotation Information
PubMed ID23326517
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23326517
StudyInsights into the genetic architecture of early stage age-related macular degeneration: a genome-wide association study meta-analysis.
Disease/TraitAge-related macular degeneration
Initial sample3,772 European ancestry cases, 16,033 European ancestry controls
Replication sample264 Asian ancestry cases, 3,926 Asian ancestry controls
Region11q14.3
Chromosome idchr11
Chromosome position89180495
Reported geneTYR
Mapped geneTYR
Upstream gene id
Downstream gene id
SNP gene ids7299
Upstream gene distance
Downstream gene distance
SNP risk allelers621313-?
SNPsrs621313
Merged0
SNP id current621313
Contextintron_variant
Intergenic0
Allele frequency0.49
P value0.000004
Pvalue mlog5.39794000867203
P value text(EA)
Or beta1.15
%95 Ci[1.09-1.2]
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitage-related macular degeneration
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001365
Study accessionGCST001814