Human SNP ID | rs61921502 |
---|---|
Human chromosome | chr12 |
Human SNP position | 65438688 |
Pig chromosome | chr5 |
Pig SNP position | 33012491 |
PubMed ID | 25607358 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25607358 |
Study | Common genetic variants influence human subcortical brain structures. |
Disease/Trait | Subcortical brain region volumes |
Initial sample | up to 13,171 European ancestry individuals |
Replication sample | up to 15,130 European ancestry individuals, 545 Japanese ancestry individuals, 736 Mexican American individuals |
Region | 12q14.3 |
Chromosome id | chr12 |
Chromosome position | 65438688 |
Reported gene | MSRB3 |
Mapped gene | MSRB3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 253827 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs61921502-T |
SNPs | rs61921502 |
Merged | 0 |
SNP id current | 61921502 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.84 |
P value | 0.00000000007 |
Pvalue mlog | 10.1549019599857 |
P value text | (Hippocampus, EA) |
Or beta | 39.9 |
%95 Ci | [27.90-51.90] mm3 increase |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | hippocampal volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005035 |
Study accession | GCST002756 |