SNP Detail For rs61839660
1.Mapping Information
Human SNP ID rs61839660
Human chromosome chr10
Human SNP position 6052734
Pig chromosome chr10
Pig SNP position 71073608
2.Annotation Information
PubMed ID22293688
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22293688
Study1000 Genomes-based imputation identifies novel and refined associations for the Wellcome Trust Case Control Consortium phase 1 Data.
Disease/TraitType 1 diabetes
Initial sample16,179 European ancestry individuals
Replication sampleNA
Region10p15.1
Chromosome idchr10
Chromosome position6052734
Reported geneIL2RA
Mapped geneIL2RA
Upstream gene id
Downstream gene id
SNP gene ids3559
Upstream gene distance
Downstream gene distance
SNP risk allelers61839660-?
SNPsrs61839660
Merged0
SNP id current61839660
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000000005
Pvalue mlog8.30102999566398
P value text
Or beta1.6
%95 Ci[1.44-1.76]
PlatformNR [6233112] (imputed)
CNVN
Mapped traittype I diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001359
Study accessionGCST001394