Human SNP ID | rs61839660 |
---|---|
Human chromosome | chr10 |
Human SNP position | 6052734 |
Pig chromosome | chr10 |
Pig SNP position | 71073608 |
PubMed ID | 22293688 |
---|---|
Journal | Eur J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22293688 |
Study | 1000 Genomes-based imputation identifies novel and refined associations for the Wellcome Trust Case Control Consortium phase 1 Data. |
Disease/Trait | Type 1 diabetes |
Initial sample | 16,179 European ancestry individuals |
Replication sample | NA |
Region | 10p15.1 |
Chromosome id | chr10 |
Chromosome position | 6052734 |
Reported gene | IL2RA |
Mapped gene | IL2RA |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3559 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs61839660-? |
SNPs | rs61839660 |
Merged | 0 |
SNP id current | 61839660 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000005 |
Pvalue mlog | 8.30102999566398 |
P value text | |
Or beta | 1.6 |
%95 Ci | [1.44-1.76] |
Platform | NR [6233112] (imputed) |
CNV | N |
Mapped trait | type I diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001359 |
Study accession | GCST001394 |