SNP Detail For rs61734084
1.Mapping Information
Human SNP ID rs61734084
Human chromosome chr3
Human SNP position 46988740
Pig chromosome chr13
Pig SNP position 33130063
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region3p21.31
Chromosome idchr3
Chromosome position46988740
Reported geneNBEAL2
Mapped geneNBEAL2
Upstream gene id
Downstream gene id
SNP gene ids23218
Upstream gene distance
Downstream gene distance
SNP risk allelers61734084-G
SNPsrs61734084
Merged0
SNP id current61734084
Contextsynonymous_variant
Intergenic0
Allele frequency0.998
P value0.000005
Pvalue mlog5.30102999566398
P value text(AA)
Or beta0.224
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264