Human SNP ID | rs6133127 |
---|---|
Human chromosome | chr20 |
Human SNP position | 4489235 |
Pig chromosome | chr17 |
Pig SNP position | 35600928 |
PubMed ID | 26584805 |
---|---|
Journal | Genes Nutr |
Link | www.ncbi.nlm.nih.gov/pubmed/26584805 |
Study | A genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population. |
Disease/Trait | Plasma omega-6 polyunsaturated fatty acid levels (arachidonic acid) |
Initial sample | 717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls |
Replication sample | NA |
Region | 20p13 |
Chromosome id | chr20 |
Chromosome position | 4489235 |
Reported gene | NR |
Mapped gene | ADRA1D - LOC105372510 |
Upstream gene id | 146 |
Downstream gene id | 105372510 |
SNP gene ids | |
Upstream gene distance | 240223 |
Downstream gene distance | 75106 |
SNP risk allele | rs6133127-T |
SNPs | rs6133127 |
Merged | |
SNP id current | 6133127 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.5871 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.0423 |
%95 Ci | [0.024-0.06] unit increase |
Platform | Illumina [up to 1980188] (imputed) |
CNV | N |
Mapped trait | arachidonic acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006808 |
Study accession | GCST003236 |