SNP Detail For rs6133127
1.Mapping Information
Human SNP ID rs6133127
Human chromosome chr20
Human SNP position 4489235
Pig chromosome chr17
Pig SNP position 35600928
2.Annotation Information
PubMed ID26584805
JournalGenes Nutr
Linkwww.ncbi.nlm.nih.gov/pubmed/26584805
StudyA genome-wide association study of n-3 and n-6 plasma fatty acids in a Singaporean Chinese population.
Disease/TraitPlasma omega-6 polyunsaturated fatty acid levels (arachidonic acid)
Initial sample717 Singaporean Chinese ancestry myocardial infarction cases, 644 Singaporean Chinese ancestry controls
Replication sampleNA
Region20p13
Chromosome idchr20
Chromosome position4489235
Reported geneNR
Mapped geneADRA1D - LOC105372510
Upstream gene id146
Downstream gene id105372510
SNP gene ids
Upstream gene distance240223
Downstream gene distance75106
SNP risk allelers6133127-T
SNPsrs6133127
Merged
SNP id current6133127
Contextintron_variant
Intergenic1
Allele frequency0.5871
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.0423
%95 Ci[0.024-0.06] unit increase
PlatformIllumina [up to 1980188] (imputed)
CNVN
Mapped traitarachidonic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006808
Study accessionGCST003236