SNP Detail For rs6129846
1.Mapping Information
Human SNP ID rs6129846
Human chromosome chr20
Human SNP position 41478674
Pig chromosome chr17
Pig SNP position 49642758
2.Annotation Information
PubMed ID25648963
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25648963
StudyGenome-wide Studies of Verbal Declarative Memory in Nondemented Older People: The Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium.
Disease/TraitVerbal declarative memory
Initial sampleUp to 27,337 European ancestry individuals, up to 472 Korkulan individuals, up to 1,267 Erasmus Rucphen Family individuals
Replication sampleUp to 10,617 European ancestry individuals, up to 3,811 African American individuals
Region20q12
Chromosome idchr20
Chromosome position41478674
Reported geneCHD6, EMILIN3
Mapped geneCHD6
Upstream gene id
Downstream gene id
SNP gene ids84181
Upstream gene distance
Downstream gene distance
SNP risk allelers6129846-C
SNPsrs6129846
Merged0
SNP id current6129846
Contextintron_variant
Intergenic0
Allele frequency0.94
P value0.000007
Pvalue mlog5.15490195998574
P value text(WL-dr)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitword list delayed recall measurement, memory performance
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006805, http://www.ebi.ac.uk/efo/EFO_0004874
Study accessionGCST002701