Human SNP ID | rs6120849 |
---|---|
Human chromosome | chr20 |
Human SNP position | 35142584 |
Pig chromosome | chr17 |
Pig SNP position | 43705549 |
PubMed ID | 20802025 |
---|---|
Journal | Blood |
Link | www.ncbi.nlm.nih.gov/pubmed/20802025 |
Study | Genome-wide association study identifies novel loci for plasma levels of protein C: the ARIC study. |
Disease/Trait | Protein C levels |
Initial sample | 8,048 European ancestry individuals |
Replication sample | 1,376 European ancestry individuals |
Region | 20q11.22 |
Chromosome id | chr20 |
Chromosome position | 35142584 |
Reported gene | EDEM2 |
Mapped gene | EDEM2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55741 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6120849-T |
SNPs | rs6120849 |
Merged | 0 |
SNP id current | 6120849 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.23 |
P value | 7E-37 |
Pvalue mlog | 36.1549019599857 |
P value text | |
Or beta | 0.14 |
%95 Ci | [0.12-0.16] ug/ml decrease |
Platform | Affymetrix [2461269] |
CNV | N |
Mapped trait | protein C measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004633 |
Study accession | GCST000780 |