SNP Detail For rs6120849
1.Mapping Information
Human SNP ID rs6120849
Human chromosome chr20
Human SNP position 35142584
Pig chromosome chr17
Pig SNP position 43705549
2.Annotation Information
PubMed ID20802025
JournalBlood
Linkwww.ncbi.nlm.nih.gov/pubmed/20802025
StudyGenome-wide association study identifies novel loci for plasma levels of protein C: the ARIC study.
Disease/TraitProtein C levels
Initial sample8,048 European ancestry individuals
Replication sample1,376 European ancestry individuals
Region20q11.22
Chromosome idchr20
Chromosome position35142584
Reported geneEDEM2
Mapped geneEDEM2
Upstream gene id
Downstream gene id
SNP gene ids55741
Upstream gene distance
Downstream gene distance
SNP risk allelers6120849-T
SNPsrs6120849
Merged0
SNP id current6120849
Contextintron_variant
Intergenic0
Allele frequency0.23
P value7E-37
Pvalue mlog36.1549019599857
P value text
Or beta0.14
%95 Ci[0.12-0.16] ug/ml decrease
PlatformAffymetrix [2461269]
CNVN
Mapped traitprotein C measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004633
Study accessionGCST000780