SNP Detail For rs61173913
1.Mapping Information
Human SNP ID rs61173913
Human chromosome chr2
Human SNP position 200487152
Pig chromosome chr15
Pig SNP position 115341336
2.Annotation Information
PubMed ID26545240
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26545240
StudyGenetic Determinants of Pelvic Organ Prolapse among African American and Hispanic Women in the Women__s Health Initiative.
Disease/TraitPelvic organ prolapse
Initial sample793 African American cases, 948 African American controls, 606 Hispanic cases, 305 Hispanic controls
Replication sampleNA
Region2q33.1
Chromosome idchr2
Chromosome position200487152
Reported geneKCTD18, SPATS2L
Mapped geneSPATS2L - KCTD18
Upstream gene id26010
Downstream gene id130535
SNP gene ids
Upstream gene distance4889
Downstream gene distance1800
SNP risk allelers61173913-TA
SNPsrs61173913
Merged0
SNP id current61173913
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.87
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.4925373
%95 Ci
PlatformAffymetrix [at least 730985] (imputed)
CNVN
Mapped traitpelvic organ prolapse
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004710
Study accessionGCST003226