Human SNP ID | rs61173913 |
---|---|
Human chromosome | chr2 |
Human SNP position | 200487152 |
Pig chromosome | chr15 |
Pig SNP position | 115341336 |
PubMed ID | 26545240 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26545240 |
Study | Genetic Determinants of Pelvic Organ Prolapse among African American and Hispanic Women in the Women__s Health Initiative. |
Disease/Trait | Pelvic organ prolapse |
Initial sample | 793 African American cases, 948 African American controls, 606 Hispanic cases, 305 Hispanic controls |
Replication sample | NA |
Region | 2q33.1 |
Chromosome id | chr2 |
Chromosome position | 200487152 |
Reported gene | KCTD18, SPATS2L |
Mapped gene | SPATS2L - KCTD18 |
Upstream gene id | 26010 |
Downstream gene id | 130535 |
SNP gene ids | |
Upstream gene distance | 4889 |
Downstream gene distance | 1800 |
SNP risk allele | rs61173913-TA |
SNPs | rs61173913 |
Merged | 0 |
SNP id current | 61173913 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.87 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.4925373 |
%95 Ci | |
Platform | Affymetrix [at least 730985] (imputed) |
CNV | N |
Mapped trait | pelvic organ prolapse |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004710 |
Study accession | GCST003226 |