Human SNP ID | rs6110577 |
---|---|
Human chromosome | chr20 |
Human SNP position | 15355108 |
Pig chromosome | chr17 |
Pig SNP position | 27113907 |
PubMed ID | 19553259 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19553259 |
Study | Common body mass index-associated variants confer risk of extreme obesity. |
Disease/Trait | Obesity (extreme) |
Initial sample | 775 European ancestry cases, 3,197 European ancestry controls |
Replication sample | NA |
Region | 20p12.1 |
Chromosome id | chr20 |
Chromosome position | 15355108 |
Reported gene | C20orf133 |
Mapped gene | MACROD2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 140733 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6110577-C |
SNPs | rs6110577 |
Merged | 0 |
SNP id current | 6110577 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.16 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 1.4 |
%95 Ci | [1.21-1.61] |
Platform | Illumina [457251] |
CNV | N |
Mapped trait | obesity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001073 |
Study accession | GCST000426 |