SNP Detail For rs610932
1.Mapping Information
Human SNP ID rs610932
Human chromosome chr11
Human SNP position 60171834
Pig chromosome chr2
Pig SNP position 10942951
2.Annotation Information
PubMed ID21460840
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21460840
StudyCommon variants at ABCA7, MS4A6A/MS4A4E, EPHA1, CD33 and CD2AP are associated with Alzheimer__s disease.
Disease/TraitAlzheimer__s disease
Initial sample6,688 European ancestry cases, 13,685 European ancestry controls
Replication sample13,182 European ancestry cases, 26,161 European ancestry controls
Region11q12.2
Chromosome idchr11
Chromosome position60171834
Reported geneMS4A4E, MS4A6A
Mapped geneMS4A6A
Upstream gene id
Downstream gene id
SNP gene ids64231
Upstream gene distance
Downstream gene distance
SNP risk allelers610932-?
SNPsrs610932
Merged0
SNP id current610932
Contextdownstream_gene_variant
Intergenic0
Allele frequency0.58
P value0.00000000000002
Pvalue mlog13.698970004336
P value text
Or beta1.11
%95 Ci[1.09-1.15]
PlatformAffymetrix, Illumina [496763]
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST001025