SNP Detail For rs6108038
1.Mapping Information
Human SNP ID rs6108038
Human chromosome chr20
Human SNP position 839019
Pig chromosome chr17
Pig SNP position 39055936
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region20p13
Chromosome idchr20
Chromosome position839019
Reported geneFAM110A
Mapped geneFAM110A
Upstream gene id
Downstream gene id
SNP gene ids83541
Upstream gene distance
Downstream gene distance
SNP risk allelers6108038-A
SNPsrs6108038
Merged0
SNP id current6108038
Contextintron_variant
Intergenic0
Allele frequency0.04
P value0.000007
Pvalue mlog5.15490195998574
P value text(Waist:height)
Or beta0.03
%95 Ci[NR] unit increase
PlatformIllumina [899892]
CNVN
Mapped traitwaist height ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005191
Study accessionGCST001762