Human SNP ID | rs6107853 |
---|---|
Human chromosome | chr20 |
Human SNP position | 6629230 |
Pig chromosome | chr17 |
Pig SNP position | 17123644 |
PubMed ID | 23669352 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23669352 |
Study | Genome-wide analysis of BMI in adolescents and young adults reveals additional insight into the effects of genetic loci over the life course. |
Disease/Trait | Body mass index |
Initial sample | Up to 13,627 European ancestry individuals |
Replication sample | Up to 16,253 European ancestry individuals |
Region | 20p12.3 |
Chromosome id | chr20 |
Chromosome position | 6629230 |
Reported gene | BMP2 |
Mapped gene | CASC20 - LOC105372516 |
Upstream gene id | 101929244 |
Downstream gene id | 105372516 |
SNP gene ids | |
Upstream gene distance | 100771 |
Downstream gene distance | 101561 |
SNP risk allele | rs6107853-A |
SNPs | rs6107853 |
Merged | 0 |
SNP id current | 6107853 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.45 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.04 |
%95 Ci | [0.022-0.058] unit increase |
Platform | Affymetrix, Illumina [557887] (imputed) |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002021 |