Human SNP ID | rs60945108 |
---|---|
Human chromosome | chr6 |
Human SNP position | 151759697 |
Pig chromosome | chr1 |
Pig SNP position | 16958463 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 6q25.1 |
Chromosome id | chr6 |
Chromosome position | 151759697 |
Reported gene | ESR1 |
Mapped gene | LOC105378060, ESR1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105378060, 2099 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs60945108-A |
SNPs | rs60945108 |
Merged | 0 |
SNP id current | 60945108 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.009 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (Light activity ) |
Or beta | 0.03 |
%95 Ci | [NR] min/d increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | physical activity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003940 |
Study accession | GCST001762 |