SNP Detail For rs60945108
1.Mapping Information
Human SNP ID rs60945108
Human chromosome chr6
Human SNP position 151759697
Pig chromosome chr1
Pig SNP position 16958463
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region6q25.1
Chromosome idchr6
Chromosome position151759697
Reported geneESR1
Mapped geneLOC105378060, ESR1
Upstream gene id
Downstream gene id
SNP gene ids105378060, 2099
Upstream gene distance
Downstream gene distance
SNP risk allelers60945108-A
SNPsrs60945108
Merged0
SNP id current60945108
Contextintron_variant
Intergenic0
Allele frequency0.009
P value0.000003
Pvalue mlog5.52287874528033
P value text(Light activity )
Or beta0.03
%95 Ci[NR] min/d increase
PlatformIllumina [899892]
CNVN
Mapped traitphysical activity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003940
Study accessionGCST001762