Human SNP ID | rs6092477 |
---|---|
Human chromosome | chr20 |
Human SNP position | 57416639 |
Pig chromosome | chr17 |
Pig SNP position | 64970275 |
PubMed ID | 20139978 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20139978 |
Study | Genome-wide association study of hematological and biochemical traits in a Japanese population. |
Disease/Trait | Mean corpuscular volume |
Initial sample | 14,364 Japanese ancestry individuals |
Replication sample | NA |
Region | 20q13.31 |
Chromosome id | chr20 |
Chromosome position | 57416639 |
Reported gene | RBM38 |
Mapped gene | RBM38 - LOC105372688 |
Upstream gene id | 55544 |
Downstream gene id | 105372688 |
SNP gene ids | |
Upstream gene distance | 7306 |
Downstream gene distance | 43835 |
SNP risk allele | rs6092477-G |
SNPs | rs6092477 |
Merged | 0 |
SNP id current | 6092477 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.42 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | |
Or beta | 0.068 |
%95 Ci | [0.044-0.092] unit decrease |
Platform | Illumina [561583] |
CNV | N |
Mapped trait | mean corpuscular volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004526 |
Study accession | GCST000585 |