Human SNP ID | rs6087771 |
---|---|
Human chromosome | chr20 |
Human SNP position | 31718921 |
Pig chromosome | chr17 |
Pig SNP position | 40248671 |
PubMed ID | 25607358 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25607358 |
Study | Common genetic variants influence human subcortical brain structures. |
Disease/Trait | Subcortical brain region volumes |
Initial sample | up to 13,171 European ancestry individuals |
Replication sample | up to 15,130 European ancestry individuals, 545 Japanese ancestry individuals, 736 Mexican American individuals |
Region | 20q11.21 |
Chromosome id | chr20 |
Chromosome position | 31718921 |
Reported gene | BCL2L1 |
Mapped gene | BCL2L1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 598 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6087771-T |
SNPs | rs6087771 |
Merged | 0 |
SNP id current | 6087771 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.71 |
P value | 0.000000000001 |
Pvalue mlog | 12 |
P value text | (Putamen, EA) |
Or beta | 33.58 |
%95 Ci | [24.31-42.85] mm3 increase |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | putamen volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006932 |
Study accession | GCST002756 |