SNP Detail For rs6080212
1.Mapping Information
Human SNP ID rs6080212
Human chromosome chr20
Human SNP position 16296985
Pig chromosome chr17
Pig SNP position 28138075
2.Annotation Information
PubMed ID26030696
JournalAm J Respir Crit Care Med
Linkwww.ncbi.nlm.nih.gov/pubmed/26030696
StudyA Genome-wide Association Study of Emphysema and Airway Quantitative Imaging Phenotypes.
Disease/TraitEmphysema imaging phenotypes
Initial sample5,385 European ancestry chronic obstructive pulmonary disease cases, 901 African American chronic obstructive pulmonary disease cases, 3,613 European ancestry controls, 2,132 African American controls
Replication sampleNA
Region20p12.1
Chromosome idchr20
Chromosome position16296985
Reported geneKIF16B
Mapped geneKIF16B
Upstream gene id
Downstream gene id
SNP gene ids55614
Upstream gene distance
Downstream gene distance
SNP risk allelers6080212-A
SNPsrs6080212
Merged
SNP id current6080212
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text(Perc15, All)
Or beta2.2
%95 Ci[1.32-3.08] unit decrease
PlatformIllumina [7600000] (imputed)
CNVN
Mapped traitemphysema imaging measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007626
Study accessionGCST002945