Human SNP ID | rs6080212 |
---|---|
Human chromosome | chr20 |
Human SNP position | 16296985 |
Pig chromosome | chr17 |
Pig SNP position | 28138075 |
PubMed ID | 26030696 |
---|---|
Journal | Am J Respir Crit Care Med |
Link | www.ncbi.nlm.nih.gov/pubmed/26030696 |
Study | A Genome-wide Association Study of Emphysema and Airway Quantitative Imaging Phenotypes. |
Disease/Trait | Emphysema imaging phenotypes |
Initial sample | 5,385 European ancestry chronic obstructive pulmonary disease cases, 901 African American chronic obstructive pulmonary disease cases, 3,613 European ancestry controls, 2,132 African American controls |
Replication sample | NA |
Region | 20p12.1 |
Chromosome id | chr20 |
Chromosome position | 16296985 |
Reported gene | KIF16B |
Mapped gene | KIF16B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55614 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6080212-A |
SNPs | rs6080212 |
Merged | |
SNP id current | 6080212 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (Perc15, All) |
Or beta | 2.2 |
%95 Ci | [1.32-3.08] unit decrease |
Platform | Illumina [7600000] (imputed) |
CNV | N |
Mapped trait | emphysema imaging measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007626 |
Study accession | GCST002945 |