Human SNP ID | rs6073450 |
---|---|
Human chromosome | chr20 |
Human SNP position | 44458008 |
Pig chromosome | chr17 |
Pig SNP position | 52316203 |
PubMed ID | 26098869 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26098869 |
Study | Common variation at 2p13.3, 3q29, 7p13 and 17q25.1 associated with susceptibility to pancreatic cancer. |
Disease/Trait | Pancreatic cancer |
Initial sample | 7,638 cases, 7,364 controls |
Replication sample | 2,287 cases, 4,205 controls |
Region | 20q13.12 |
Chromosome id | chr20 |
Chromosome position | 44458008 |
Reported gene | intergenic |
Mapped gene | LINC01430 - C20orf62 |
Upstream gene id | 101927242 |
Downstream gene id | 140834 |
SNP gene ids | |
Upstream gene distance | 7451 |
Downstream gene distance | 3755 |
SNP risk allele | rs6073450-A |
SNPs | rs6073450 |
Merged | |
SNP id current | 6073450 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.381 |
P value | 0.0000009 |
Pvalue mlog | 6.04575749056067 |
P value text | |
Or beta | 1.11 |
%95 Ci | [1.06-1.15] |
Platform | Illumina [866891] (imputed) |
CNV | N |
Mapped trait | pancreatic carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002618 |
Study accession | GCST002991 |