SNP Detail For rs6070346
1.Mapping Information
Human SNP ID rs6070346
Human chromosome chr20
Human SNP position 58088218
Pig chromosome chr17
Pig SNP position 65536098
2.Annotation Information
PubMed ID22424883
JournalJ Allergy Clin Immunol
Linkwww.ncbi.nlm.nih.gov/pubmed/22424883
StudyGenome-wide association study of lung function decline in adults with and without asthma.
Disease/TraitPulmonary function decline
Initial sample1,441 European ancestry asthma cases, 2,677 European ancestry controls
Replication sample1,160 European ancestry asthma cases, 10,858 European ancestry controls
Region20q13.32
Chromosome idchr20
Chromosome position58088218
Reported geneintergenic
Mapped geneLOC105376992 - C20orf85
Upstream gene id105376992
Downstream gene id128602
SNP gene ids
Upstream gene distance83638
Downstream gene distance62709
SNP risk allelers6070346-?
SNPsrs6070346
Merged0
SNP id current6070346
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text(FEV1/FVC decline in asthmatics)
Or beta0.1735
%95 Ci[0.1-0.247] unit increase
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitFEV/FEC ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST001444