SNP Detail For rs6060821
1.Mapping Information
Human SNP ID rs6060821
Human chromosome chr20
Human SNP position 31706231
Pig chromosome chr17
Pig SNP position 40237981
2.Annotation Information
PubMed ID26184070
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26184070
StudyGene-set and multivariate genome-wide association analysis of oppositional defiant behavior subtypes in attention-deficit/hyperactivity disorder.
Disease/TraitOppositional defiant disorder in attention-deficit hyperactivity disorder
Initial sample750 European ancestry individuals
Replication sampleNA
Region20q11.21
Chromosome idchr20
Chromosome position31706231
Reported geneBCL2L1, COX4I2, TPX2, MYLK2, TTLL9, FOXS1
Mapped geneBCL2L1, LOC105372589
Upstream gene id
Downstream gene id
SNP gene ids598, 105372589
Upstream gene distance
Downstream gene distance
SNP risk allelers6060821-?
SNPsrs6060821
Merged
SNP id current6060821
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci
PlatformPerlegen [1871025] (imputed)
CNVN
Mapped traitattention deficit hyperactivity disorder, oppositional defiant disorder measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003888, http://www.ebi.ac.uk/efo/EFO_0007679
Study accessionGCST003030