Human SNP ID | rs605920 |
---|---|
Human chromosome | chr18 |
Human SNP position | 65217682 |
Pig chromosome | chr1 |
Pig SNP position | 174313609 |
PubMed ID | 23247143 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23247143 |
Study | Association of genome-wide variation with highly sensitive cardiac troponin-T levels in European Americans and Blacks: a meta-analysis from atherosclerosis risk in communities and cardiovascular health studies. |
Disease/Trait | Cardiac Troponin-T levels |
Initial sample | 9,491 European ancestry individuals, up to 2,053 African American individuals |
Replication sample | NA |
Region | 18q22.1 |
Chromosome id | chr18 |
Chromosome position | 65217682 |
Reported gene | CDH7 |
Mapped gene | LOC105372168 - LOC105372169 |
Upstream gene id | 105372168 |
Downstream gene id | 105372169 |
SNP gene ids | |
Upstream gene distance | 73554 |
Downstream gene distance | 247210 |
SNP risk allele | rs605920-C |
SNPs | rs605920 |
Merged | 0 |
SNP id current | 605920 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (Continous Variable) |
Or beta | 0.04 |
%95 Ci | [0.02-0.05] ug/L decrease |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | cardiac troponin T measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005043 |
Study accession | GCST001776 |