SNP Detail For rs605920
1.Mapping Information
Human SNP ID rs605920
Human chromosome chr18
Human SNP position 65217682
Pig chromosome chr1
Pig SNP position 174313609
2.Annotation Information
PubMed ID23247143
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23247143
StudyAssociation of genome-wide variation with highly sensitive cardiac troponin-T levels in European Americans and Blacks: a meta-analysis from atherosclerosis risk in communities and cardiovascular health studies.
Disease/TraitCardiac Troponin-T levels
Initial sample9,491 European ancestry individuals, up to 2,053 African American individuals
Replication sampleNA
Region18q22.1
Chromosome idchr18
Chromosome position65217682
Reported geneCDH7
Mapped geneLOC105372168 - LOC105372169
Upstream gene id105372168
Downstream gene id105372169
SNP gene ids
Upstream gene distance73554
Downstream gene distance247210
SNP risk allelers605920-C
SNPsrs605920
Merged0
SNP id current605920
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text(Continous Variable)
Or beta0.04
%95 Ci[0.02-0.05] ug/L decrease
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitcardiac troponin T measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005043
Study accessionGCST001776