SNP Detail For rs6056
1.Mapping Information
Human SNP ID rs6056
Human chromosome chr4
Human SNP position 154567669
Pig chromosome chr8
Pig SNP position 78956223
2.Annotation Information
PubMed ID20031577
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20031577
StudyNovel loci, including those related to Crohn disease, psoriasis, and inflammation, identified in a genome-wide association study of fibrinogen in 17 686 women: the Women__s Genome Health Study.
Disease/TraitFibrinogen
Initial sample17,686 European ancestry female individuals
Replication sampleNA
Region4q31.3
Chromosome idchr4
Chromosome position154567669
Reported geneFGB, FGA, FGG
Mapped geneFGB
Upstream gene id
Downstream gene id
SNP gene ids2244
Upstream gene distance
Downstream gene distance
SNP risk allelers6056-A
SNPsrs6056
Merged0
SNP id current6056
Contextsynonymous_variant
Intergenic0
Allele frequency0.18
P value8E-39
Pvalue mlog38.096910013008
P value text
Or beta12.94
%95 Ci[NR] mg/dl increase
PlatformIllumina [337343]
CNVN
Mapped traitfibrinogen measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004623
Study accessionGCST000368