Human SNP ID | rs6055685 |
---|---|
Human chromosome | chr20 |
Human SNP position | 8233139 |
Pig chromosome | chr17 |
Pig SNP position | 19180102 |
PubMed ID | 26079190 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26079190 |
Study | A genome-wide association study of suicidal behavior. |
Disease/Trait | Suicide ideation score in major depressive disorder |
Initial sample | 358 European ancestry individuals |
Replication sample | NA |
Region | 20p12.3 |
Chromosome id | chr20 |
Chromosome position | 8233139 |
Reported gene | PLCB1 |
Mapped gene | PLCB1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23236 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6055685-A |
SNPs | rs6055685 |
Merged | |
SNP id current | 6055685 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.18 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | |
Or beta | 3.568 |
%95 Ci | Suicidal ideation score increase |
Platform | Illumina [794207] |
CNV | N |
Mapped trait | suicide ideation measurement, unipolar depression |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007619, http://www.ebi.ac.uk/efo/EFO_0003761 |
Study accession | GCST002974 |