Human SNP ID | rs6054906 |
---|---|
Human chromosome | chr20 |
Human SNP position | 7314256 |
Pig chromosome | chr17 |
Pig SNP position | 18037932 |
PubMed ID | 22952603 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/22952603 |
Study | Genome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13). |
Disease/Trait | Response to amphetamines |
Initial sample | 1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals |
Replication sample | NA |
Region | 20p12.3 |
Chromosome id | chr20 |
Chromosome position | 7314256 |
Reported gene | intergenic |
Mapped gene | LOC101929288 - LOC101929312 |
Upstream gene id | 101929288 |
Downstream gene id | 101929312 |
SNP gene ids | |
Upstream gene distance | 6749 |
Downstream gene distance | 33177 |
SNP risk allele | rs6054906-? |
SNPs | rs6054906 |
Merged | 0 |
SNP id current | 6054906 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (SF4) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [5476100] (imputed) |
CNV | N |
Mapped trait | response to drug |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0042493 |
Study accession | GCST001651 |