Human SNP ID | rs60490158 |
---|---|
Human chromosome | chr2 |
Human SNP position | 23945318 |
Pig chromosome | chr3 |
Pig SNP position | 121975903 |
PubMed ID | 25865494 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25865494 |
Study | Genome-wide Analysis of Body Proportion Classifies Height-Associated Variants by Mechanism of Action and Implicates Genes Important for Skeletal Development. |
Disease/Trait | Sitting height ratio |
Initial sample | 3,545 African Americans individuals, 12,965 European ancestry women, 8,625 European ancestry men |
Replication sample | NA |
Region | 2p23.3 |
Chromosome id | chr2 |
Chromosome position | 23945318 |
Reported gene | NR |
Mapped gene | UBXN2A |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 165324 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs60490158-A |
SNPs | rs60490158 |
Merged | 0 |
SNP id current | 60490158 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.459 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | (EA, men) |
Or beta | 0.077 |
%95 Ci | [0.048-0.106] unit increase |
Platform | Affymetrix, Illumina [up to 10250422] (imputed) |
CNV | N |
Mapped trait | sitting height ratio |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007118 |
Study accession | GCST002843 |