SNP Detail For rs6047844
1.Mapping Information
Human SNP ID rs6047844
Human chromosome chr20
Human SNP position 22056937
Pig chromosome chr17
Pig SNP position 33613742
2.Annotation Information
PubMed ID22693459
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22693459
StudySix novel susceptibility Loci for early-onset androgenetic alopecia and their unexpected association with common diseases.
Disease/TraitMale-pattern baldness
Initial sample3,891 European ancestry cases, 8,915 European ancestry controls
Replication sampleNA
Region20p11.22
Chromosome idchr20
Chromosome position22056937
Reported genePAX1, FOXA2
Mapped geneLINC01432
Upstream gene id
Downstream gene id
SNP gene ids100270679
Upstream gene distance
Downstream gene distance
SNP risk allelers6047844-T
SNPsrs6047844
Merged0
SNP id current6047844
Contextintron_variant
Intergenic0
Allele frequency0.46
P value2E-39
Pvalue mlog38.698970004336
P value text
Or beta1.6
%95 Ci[1.49-1.72]
PlatformAffymetrix, Illumina [2391230] (imputed)
CNVN
Mapped traitandrogenetic alopecia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004191
Study accessionGCST001548