Human SNP ID | rs6044834 |
---|---|
Human chromosome | chr20 |
Human SNP position | 17455828 |
Pig chromosome | chr17 |
Pig SNP position | 29310906 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 20p12.1 |
Chromosome id | chr20 |
Chromosome position | 17455828 |
Reported gene | PCSK2 |
Mapped gene | PCSK2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5126 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6044834-C |
SNPs | rs6044834 |
Merged | 0 |
SNP id current | 6044834 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.069 |
P value | 0.00000008 |
Pvalue mlog | 7.09691001300805 |
P value text | (Total antioxidants ) |
Or beta | 0.04 |
%95 Ci | [NR] mM increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | antioxidant measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005119 |
Study accession | GCST001762 |