Human SNP ID | rs6041428 |
---|---|
Human chromosome | chr20 |
Human SNP position | 12525698 |
Pig chromosome | chr17 |
Pig SNP position | 23883112 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Vascular brain injury |
Initial sample | up to 2,940 individuals |
Replication sample | NA |
Region | 20p12.1 |
Chromosome id | chr20 |
Chromosome position | 12525698 |
Reported gene | intergenic |
Mapped gene | LOC105372534 - LOC105372533 |
Upstream gene id | 105372534 |
Downstream gene id | 105372533 |
SNP gene ids | |
Upstream gene distance | 132004 |
Downstream gene distance | 124147 |
SNP risk allele | rs6041428-G |
SNPs | rs6041428 |
Merged | 0 |
SNP id current | 6041428 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.9842 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.256 |
%95 Ci | [0.71-1.8] unit decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | vascular brain injury measurement, vascular brain injury |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006800, http://www.ebi.ac.uk/efo/EFO_0006791 |
Study accession | GCST002590 |