SNP Detail For rs603894
1.Mapping Information
Human SNP ID rs603894
Human chromosome chr13
Human SNP position 102702977
Pig chromosome chr11
Pig SNP position 78343541
2.Annotation Information
PubMed ID25886283
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25886283
StudyGenome-wide association study of serum minerals levels in children of different ethnic background.
Disease/TraitMagnesium levels
Initial sample2,317 European ancestry children, 1,283 African-American ancestry children
Replication sampleNA
Region13q33.1
Chromosome idchr13
Chromosome position102702977
Reported geneNR
Mapped geneMETTL21C - CCDC168
Upstream gene id196541
Downstream gene id643677
SNP gene ids
Upstream gene distance8456
Downstream gene distance26390
SNP risk allelers603894-A
SNPsrs603894
Merged0
SNP id current603894
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text(EA)
Or beta0.03641
%95 Ci(-0.05232--0.02049) mg/dl decrease
PlatformIllumina [up to 509150]
CNVN
Mapped traitmagnesium measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004845
Study accessionGCST002860