Human SNP ID | rs603446 |
---|---|
Human chromosome | chr11 |
Human SNP position | 116783719 |
Pig chromosome | chr9 |
Pig SNP position | 49246396 |
PubMed ID | 21909109 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21909109 |
Study | Large-scale genome-wide association studies in East Asians identify new genetic loci influencing metabolic traits. |
Disease/Trait | Triglycerides |
Initial sample | 12,545 Korean ancestry individuals |
Replication sample | Up to 30,395 East Asian ancestry individuals |
Region | 11q23.3 |
Chromosome id | chr11 |
Chromosome position | 116783719 |
Reported gene | ZNF259, APOA1, APOC3, APOA4, APOA5, BUD13 |
Mapped gene | ZPR1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 8882 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs603446-T |
SNPs | rs603446 |
Merged | 0 |
SNP id current | 603446 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.23 |
P value | 2E-86 |
Pvalue mlog | 85.698970004336 |
P value text | |
Or beta | 0.0876 |
%95 Ci | [0.079-0.096] mg/dL decrease |
Platform | Affymetrix [~ 2200000] (imputed) |
CNV | N |
Mapped trait | triglyceride measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004530 |
Study accession | GCST001230 |