SNP Detail For rs60338266
1.Mapping Information
Human SNP ID rs60338266
Human chromosome chr6
Human SNP position 162415180
Pig chromosome chr1
Pig SNP position 7220753
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region6q26
Chromosome idchr6
Chromosome position162415180
Reported genePARK2
Mapped genePARK2, LOC105369171
Upstream gene id
Downstream gene id
SNP gene ids5071, 105369171
Upstream gene distance
Downstream gene distance
SNP risk allelers60338266-A
SNPsrs60338266
Merged0
SNP id current60338266
Contextintron_variant
Intergenic0
Allele frequency0.695
P value0.000005
Pvalue mlog5.30102999566398
P value text(AA)
Or beta0.016
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264