Human SNP ID | rs6026584 |
---|---|
Human chromosome | chr20 |
Human SNP position | 58894018 |
Pig chromosome | chr17 |
Pig SNP position | 66355096 |
PubMed ID | 22797727 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22797727 |
Study | Meta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations. |
Disease/Trait | Renal function-related traits (BUN) |
Initial sample | 39,717 East Asian ancestry individuals |
Replication sample | 17,461 East Asian ancestry individuals |
Region | 20q13.32 |
Chromosome id | chr20 |
Chromosome position | 58894018 |
Reported gene | GNAS |
Mapped gene | GNAS |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2778 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6026584-T |
SNPs | rs6026584 |
Merged | 0 |
SNP id current | 6026584 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.32 |
P value | 0.000000009 |
Pvalue mlog | 8.04575749056067 |
P value text | |
Or beta | 0.0052 |
%95 Ci | [0.0034-0.0070] mg/dl increase |
Platform | Affymetrix, Illumina [2281523] (imputed) |
CNV | N |
Mapped trait | renal system measurement, blood urea nitrogen measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004742, http://www.ebi.ac.uk/efo/EFO_0004741 |
Study accession | GCST001610 |