SNP Detail For rs602633
1.Mapping Information
Human SNP ID rs602633
Human chromosome chr1
Human SNP position 109278889
Pig chromosome chr4
Pig SNP position 121297709
2.Annotation Information
PubMed ID24262325
JournalStroke
Linkwww.ncbi.nlm.nih.gov/pubmed/24262325
StudyShared genetic susceptibility to ischemic stroke and coronary artery disease: a genome-wide analysis of common variants.
Disease/TraitCoronary artery disease
Initial sample33,398 cases, 75,726 controls
Replication sampleNA
Region1p13.3
Chromosome idchr1
Chromosome position109278889
Reported geneSORT1
Mapped geneCELSR2 - PSRC1
Upstream gene id1952
Downstream gene id84722
SNP gene ids
Upstream gene distance3133
Downstream gene distance665
SNP risk allelers602633-T
SNPsrs602633
Merged0
SNP id current602633
Contextdownstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.00000001
Pvalue mlog8
P value text
Or beta1.1111
%95 Ci[1.08-1.15]
PlatformIllumina [575000] (imputed)
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST002289