SNP Detail For rs60217712
1.Mapping Information
Human SNP ID rs60217712
Human chromosome chr4
Human SNP position 97632665
Pig chromosome chr8
Pig SNP position 131686570
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region4q22.3
Chromosome idchr4
Chromosome position97632665
Reported geneC4orf37
Mapped geneSTPG2
Upstream gene id
Downstream gene id
SNP gene ids285555
Upstream gene distance
Downstream gene distance
SNP risk allelers60217712-T
SNPsrs60217712
Merged0
SNP id current60217712
Contextintron_variant
Intergenic0
Allele frequency0.563
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta0.015
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264