Human SNP ID | rs601338 |
---|---|
Human chromosome | chr19 |
Human SNP position | 48703417 |
Pig chromosome | chr6 |
Pig SNP position | 49790474 |
PubMed ID | 24816252 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24816252 |
Study | An atlas of genetic influences on human blood metabolites. |
Disease/Trait | Blood metabolite levels |
Initial sample | 7,824 European ancestry individuals |
Replication sample | NA |
Region | 19q13.33 |
Chromosome id | chr19 |
Chromosome position | 48703417 |
Reported gene | FUT2 |
Mapped gene | FUT2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2524 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs601338-A |
SNPs | rs601338 |
Merged | 0 |
SNP id current | 601338 |
Context | stop_gained |
Intergenic | 0 |
Allele frequency | 0.43 |
P value | 0.00000000003 |
Pvalue mlog | 10.5228787452803 |
P value text | (ADpSGEGDFXAEGGGVR) |
Or beta | 0.041 |
%95 Ci | [0.029-0.053] unit increase |
Platform | Affymetrix, Illumina [2100000] (imputed) |
CNV | N |
Mapped trait | blood metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005664 |
Study accession | GCST002443 |
PubMed ID | 24816252 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24816252 |
Study | An atlas of genetic influences on human blood metabolites. |
Disease/Trait | Blood metabolite ratios |
Initial sample | Up to 5,591 European ancestry individuals |
Replication sample | Up to 1,767 European ancestry individuals |
Region | 19q13.33 |
Chromosome id | chr19 |
Chromosome position | 48703417 |
Reported gene | FUT2 |
Mapped gene | FUT2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2524 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs601338-A |
SNPs | rs601338 |
Merged | 0 |
SNP id current | 601338 |
Context | stop_gained |
Intergenic | 0 |
Allele frequency | 0.43 |
P value | 2E-20 |
Pvalue mlog | 19.698970004336 |
P value text | (ADSGEGDFXAEGGGVR/ADpSGEGDFXAEGGGVR) |
Or beta | 0.055 |
%95 Ci | [0.043-0.067] unit decrease |
Platform | Affymetrix, Illumina [2100000] (imputed) |
CNV | N |
Mapped trait | blood metabolite measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005664 |
Study accession | GCST002442 |