SNP Detail For rs6013355
1.Mapping Information
Human SNP ID rs6013355
Human chromosome chr20
Human SNP position 52021121
Pig chromosome chr17
Pig SNP position 59849270
2.Annotation Information
PubMed ID22589738
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22589738
StudyGenome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Disease/TraitSubcutaneous adipose tissue
Initial sample5,560 European ancestry female individuals, 4,997 European ancestry male individuals
Replication sampleNA
Region20q13.2
Chromosome idchr20
Chromosome position52021121
Reported geneZFP64
Mapped geneSALL4 - LOC105372664
Upstream gene id57167
Downstream gene id105372664
SNP gene ids
Upstream gene distance107876
Downstream gene distance59750
SNP risk allelers6013355-A
SNPsrs6013355
Merged0
SNP id current6013355
Contextintergenic_variant
Intergenic1
Allele frequency0.84
P value0.000005
Pvalue mlog5.30102999566398
P value text(men)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitsubcutaneous adipose tissue measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004766
Study accessionGCST001521