SNP Detail For rs5992105
1.Mapping Information
Human SNP ID rs5992105
Human chromosome chr22
Human SNP position 17800481
Pig chromosome chr5
Pig SNP position 72165270
2.Annotation Information
PubMed ID24023788
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24023788
StudyGene network analysis in a pediatric cohort identifies novel lung function genes.
Disease/TraitLung function (forced expiratory flow between 25% and 75% of forced vital capacity)
Initial sample1,015 European ancestry individuals, 541 African American individuals
Replication sampleNA
Region22q11.21
Chromosome idchr22
Chromosome position17800481
Reported geneNR
Mapped geneMICAL3
Upstream gene id
Downstream gene id
SNP gene ids57553
Upstream gene distance
Downstream gene distance
SNP risk allelers5992105-?
SNPsrs5992105
Merged0
SNP id current5992105
Contextintron_variant
Intergenic0
Allele frequency
P value0.000009
Pvalue mlog5.04575749056067
P value text(AA)
Or beta
%95 Ci
PlatformIllumina [up to 524000]
CNVN
Mapped traitmaximal midexpiratory flow rate
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004313
Study accessionGCST002163