SNP Detail For rs5982533
1.Mapping Information
Human SNP ID rs5982533
Human chromosome chrX
Human SNP position 112403236
Pig chromosome chrX
Pig SNP position 106648144
2.Annotation Information
PubMed ID19260141
JournalCroat Med J
Linkwww.ncbi.nlm.nih.gov/pubmed/19260141
StudyGenome-wide association study of biochemical traits in Korcula Island, Croatia.
Disease/TraitBiochemical measures
Initial sample898 Korculan individuals
Replication sampleNA
RegionXq23
Chromosome idchrX
Chromosome position112403236
Reported geneZCCHC16
Mapped geneZCCHC16
Upstream gene id
Downstream gene id
SNP gene ids340595
Upstream gene distance
Downstream gene distance
SNP risk allelers5982533-G
SNPsrs5982533
Merged0
SNP id current5982533
Contextintergenic_variant
Intergenic0
Allele frequency0.22
P value0.000007
Pvalue mlog5.15490195998574
P value text(triglycerides)
Or beta0.23
%95 Ci[0.13-0.33] mmol/L decrease
PlatformIllumina [316730]
CNVN
Mapped traittriglyceride measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004530
Study accessionGCST000328