Human SNP ID | rs5980075 |
---|---|
Human chromosome | chrX |
Human SNP position | 14932409 |
Pig chromosome | chrX |
Pig SNP position | 12443066 |
PubMed ID | 23192594 |
---|---|
Journal | Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23192594 |
Study | Gene-environment interactions and obesity traits among postmenopausal African-American and Hispanic women in the Women__s Health Initiative SHARe Study. |
Disease/Trait | Waist-to-hip circumference ratio (interaction) |
Initial sample | 8,203 African American females, 3,484 Hispanic females |
Replication sample | NA |
Region | Xp22.2 |
Chromosome id | chrX |
Chromosome position | 14932409 |
Reported gene | MOSPD2, LOC100128521 |
Mapped gene | MOSPD2 - LOC102724092 |
Upstream gene id | 158747 |
Downstream gene id | 102724092 |
SNP gene ids | |
Upstream gene distance | 10243 |
Downstream gene distance | 299825 |
SNP risk allele | rs5980075-T |
SNPs | rs5980075 |
Merged | 0 |
SNP id current | 5980075 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.47 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | (Hispanic, Dietary energy) |
Or beta | 0.04 |
%95 Ci | [0.03-0.06] unit increase |
Platform | Affymetrix [706791] |
CNV | N |
Mapped trait | waist-hip ratio |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004343 |
Study accession | GCST001754 |