Human SNP ID | rs597503 |
---|---|
Human chromosome | chr18 |
Human SNP position | 6939948 |
Pig chromosome | chr6 |
Pig SNP position | 93633381 |
PubMed ID | 21658281 |
---|---|
Journal | BMC Cardiovasc Disord |
Link | www.ncbi.nlm.nih.gov/pubmed/21658281 |
Study | GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease. |
Disease/Trait | Sudden cardiac arrest |
Initial sample | 88 European ancestry cases, 517 European ancestry controls |
Replication sample | NA |
Region | 18p11.31 |
Chromosome id | chr18 |
Chromosome position | 6939948 |
Reported gene | intergenic |
Mapped gene | LINC00668 - LAMA1 |
Upstream gene id | 400643 |
Downstream gene id | 284217 |
SNP gene ids | |
Upstream gene distance | 10079 |
Downstream gene distance | 1796 |
SNP risk allele | rs597503-? |
SNPs | rs597503 |
Merged | 0 |
SNP id current | 597503 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.13 |
P value | 0.00000002 |
Pvalue mlog | 7.69897000433601 |
P value text | (Recessive) |
Or beta | 1.45 |
%95 Ci | [1.27-1.65] |
Platform | Affymetrix [319222] |
CNV | N |
Mapped trait | sudden cardiac arrest |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004278 |
Study accession | GCST001099 |