Human SNP ID | rs5955543 |
---|---|
Human chromosome | chrX |
Human SNP position | 17680277 |
Pig chromosome | chrX |
Pig SNP position | 15240250 |
PubMed ID | 22544364 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22544364 |
Study | A genome-wide association study identifies susceptibility loci for Wilms tumor. |
Disease/Trait | Wilms tumor |
Initial sample | 757 European ancestry cases, 1,879 European ancestry controls |
Replication sample | 1,488 European ancestry cases, 3,851 European ancestry controls |
Region | Xp22.13 |
Chromosome id | chrX |
Chromosome position | 17680277 |
Reported gene | NR |
Mapped gene | NHS |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4810 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs5955543-G |
SNPs | rs5955543 |
Merged | 0 |
SNP id current | 5955543 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.01 |
P value | 0.000000001 |
Pvalue mlog | 9 |
P value text | |
Or beta | 2.64 |
%95 Ci | [1.74-4.01] |
Platform | Illumina [599255] |
CNV | N |
Mapped trait | Nephroblastoma |
Mapped trait URI | http://www.orpha.net/ORDO/Orphanet_654 |
Study accession | GCST001500 |