SNP Detail For rs5955543
1.Mapping Information
Human SNP ID rs5955543
Human chromosome chrX
Human SNP position 17680277
Pig chromosome chrX
Pig SNP position 15240250
2.Annotation Information
PubMed ID22544364
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22544364
StudyA genome-wide association study identifies susceptibility loci for Wilms tumor.
Disease/TraitWilms tumor
Initial sample757 European ancestry cases, 1,879 European ancestry controls
Replication sample1,488 European ancestry cases, 3,851 European ancestry controls
RegionXp22.13
Chromosome idchrX
Chromosome position17680277
Reported geneNR
Mapped geneNHS
Upstream gene id
Downstream gene id
SNP gene ids4810
Upstream gene distance
Downstream gene distance
SNP risk allelers5955543-G
SNPsrs5955543
Merged0
SNP id current5955543
Contextintron_variant
Intergenic0
Allele frequency0.01
P value0.000000001
Pvalue mlog9
P value text
Or beta2.64
%95 Ci[1.74-4.01]
PlatformIllumina [599255]
CNVN
Mapped traitNephroblastoma
Mapped trait URIhttp://www.orpha.net/ORDO/Orphanet_654
Study accessionGCST001500