Human SNP ID | rs594442 |
---|---|
Human chromosome | chr6 |
Human SNP position | 93138166 |
Pig chromosome | chr1 |
Pig SNP position | 68154016 |
PubMed ID | 21546767 |
---|---|
Journal | Am J Nephrol |
Link | www.ncbi.nlm.nih.gov/pubmed/21546767 |
Study | Genome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes. |
Disease/Trait | Dialysis-related mortality |
Initial sample | 610 African American type 2 diabetes cases |
Replication sample | NA |
Region | 6q16.1 |
Chromosome id | chr6 |
Chromosome position | 93138166 |
Reported gene | EPHA7 |
Mapped gene | COPS5P1 - EPHA7 |
Upstream gene id | 135270 |
Downstream gene id | 2045 |
SNP gene ids | |
Upstream gene distance | 45180 |
Downstream gene distance | 101854 |
SNP risk allele | rs594442-? |
SNPs | rs594442 |
Merged | 0 |
SNP id current | 594442 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.05 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 1.99 |
%95 Ci | [1.50-2.64] |
Platform | Affymetrix [832357] |
CNV | N |
Mapped trait | chronic kidney disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003884 |
Study accession | GCST001066 |