SNP Detail For rs5943057
1.Mapping Information
Human SNP ID rs5943057
Human chromosome chrX
Human SNP position 110695977
Pig chromosome chrX
Pig SNP position 104377534
2.Annotation Information
PubMed ID21378988
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21378988
StudyA genome-wide association study in Europeans and South Asians identifies five new loci for coronary artery disease.
Disease/TraitCoronary heart disease
Initial sample8,424 European ancestry cases, 7,268 European ancestry controls, 6,996 South Asian ancestry cases, 7,794 South Asian ancestry controls
Replication sample18,049 European ancestry cases, 16,357 European ancestry controls, 3,359 South Asian ancestry cases, 2,828 South Asian ancestry controls
RegionXq23
Chromosome idchrX
Chromosome position110695977
Reported geneintergenic
Mapped geneCHRDL1
Upstream gene id
Downstream gene id
SNP gene ids91851
Upstream gene distance
Downstream gene distance
SNP risk allelers5943057-?
SNPsrs5943057
Merged0
SNP id current5943057
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta
%95 Ci
PlatformIllumina [574919]
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST000999